Projects

Sampada Pokharel

Website and Quarto

What is Quarto?

  • Open-source scientific and technical publishing system
  • R, Python, Julia, and Observable
  • Documents can be html, pdf, word, and markdowns - can use knitr to run R code
  • Can use in RStudio, VS Code, Jupyter Lab, etc
  • Create presentations, websites, books, journal articles, and projects

Website Using Quarto

Website Basics

  • Very simple and easy to create
    • Use markdowns for each page markdown example
    • Can run and display codes
  • Minimal use of html and css
  • Quarto themes

Website Customization

  • Create theme.scss
    • Use css and html to personalize webpages
  • Customize fonts, colors, and icons displayed

OpenAlex

What is OpenAlex?

  • An open catalog of scholarly papers, authors, institutions, etc.
  • Free and open-source
  • API

Publications within IPS

IPS Publication Visualization

  • Publication lists through Disqover
  • Visualize
  • Needed to query information
    • Authors, concepts, publishing venue, etc

OpenAlex R packages

  • 3 r packages
  1. OpenAlexR by Em Maloney
  2. OpenAlexR by Markus Skyttner
  3. OpenAlexR by Massismo Aria

OpenAlexR by Em Maloney

Query

  1. Work
    • ID Type (DOIs,PMID, etc)
    • IDs
  2. Authors - Nested graph author
  3. Venues
  4. Institution
  5. Concepts - Bar graph

OpenAlexR by Markus Skyttner

  • Works

  • Authors

  • Venues

  • Institutions

  • Concepts

  • Takes account of missing information

OpenAlexR by Massismo Aria

  • Publications

  • Authors

  • Venues

  • Institutions

  • Concepts

  • Has a filter to search for articles just based on concepts

Which package to use?

RiskMatric Package

  • Evaluates the quality of a package
  • Checks for
    • Coding best practices
    • Documentation
    • Engagement
    • Bugs
  • Scores the package out of 1

OpenAlex R Package Comparision

Our R Package Pick

Em Maloney

IPS Publication Visualization

Flex Dashboard

  • Similar to R markdown
  • Makes a default page payout
  • Knitr it to see what the dashboard looks like
  • Publishing to RConnect is easy

All Things BMS

All Things BMS

Trang Le created this repository to help with the on boarding process

R Packages

Time Series R Package

  • Working progress
  • Skeleton of the package done

Future Works

Future Works

  • Time series R package
  • Refining webpage
  • Fixing error message openalexR package
    • Error message user friendly
    • List DOIs with errors

Acknowledgment

Nicole Glazer

Iain Wallace

Trang Le

Feichen Shen

Afshin Mashadi-Hossein

Leslie Emery

Matthew LaFave

Eugen Lounkine

Thank You!

Any Questions?